From risk to recovery: measuring the status of ecosystems
(He/Him)
University of New South Wales — Sydney
University of New South Wales — Sydney
Mayan riviera coral reefs - sample of iNaturalist observations
Examples of global and local ecosystem collapse
A schematic of mountain glacier ecology, hydrology and geomicrobiology. From Hotaling, Hood, and Hamilton (2017)
Change in microbiota
Ice mass balance
Indicators of (dis-)equilibrium in ice conditions
Bioclimatic variables
Following slides based on:
Histogram of present conditions of two bioclimatic variables in the Cordillera de Mérida and two neighboring regions. We considered 19 variables for 12 regions.
Plot of initial (\(V_{0}\)) vs. final values (\(V_{F}\)) for the Ruwenzori mountains in Uganda: expected declines in suitability.
Estimated ice mass in Megatonnes for Kilimanjaro. Points represent the sum of median ice mass for each outline, and the grey bars represent the uncertainty (\(\pm\) median absolute deviation).
Following slides based on:
Plot of initial (\(V_{0}\)) vs. final values (\(V_{F}\)) for the Ruwenzori mountains in Uganda: introducing a decision thresholds for suitability.
Range standardisation of observed changes \(\mathrm{RS} = \frac{V_{0} - V_{F}}{V_{0} - V_{C}}\)
Range standardisation of observed changes \(\mathrm{RS} = \frac{V_{0} - V_{F}}{V_{0} - V_{C}}\)
Time series of RS values for the ice mass indicator variable for the tropical glaciers of Kilimanjaro using 2001 as initial value. Best estimate and uncertainty interval.
Histogram of the \(RS_{cor}\) values for the Tropical Glacier Ecosystem of the Cordilleras Norte de Peru using the maximum accuracy threshold.
Comparing the histogram of the \(RS_{cor}\) values with a modified empirical cumulative distriution function for the Tropical Glacier Ecosystem of Cordilleras de Colombia using the maximum accuracy threshold.
Understanding causes and symptoms
Properties and processes of target ecosystem type
Scalar, temporal and spatial component
Measurable thresholds of change
Estimates based on spatial data, inferences or expert knowledge
Spoilt for choice? what to do with multiple indicators
Clear relationships between them: independent indicators or combined indicator ?
Preference for direct indicators of symptoms
Cover as many dimensions as possible but avoid redundancy
Explicit rules for combination
Reproducible workflows for the RLE assessment of the tropical glacier ecosystem of the Cordillera de Mérida at: https://red-list-ecosystem.github.io/T6.1-SA-01-VE-01-Cordillera-Merida/
General framework for RLE evaluation of coral reef ecosystems at: https://github.com/red-list-ecosystem/cordio-ea_iucn_regional-rle_coral_reefs/wiki
More examples of code and workflows will be added to:
Questions ?
j.ferrer@unsw.edu.au
This presentation was prepared by José R. Ferrer-Paris and is shared under license: Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
This presentation is available at:
jrfep.quarto.pub/rle-indicators-design.
It was created using RStudio, Quarto, y reveal.js.
Source code available at:
bitbucket.org/iucn-presentations/rle-indicators-presentation.
Photographs and images from gobal-ecosystems.org:
[1] "Freshwater aquaculture ponds, Rumpin, West Java, Indonesia / Tom Fisk on Pexels"
[2] "Giant kelp forest, Southern California / Brett Seymour / US NPS"
[3] "Mola mola (sunfish) near Nusa Lembongan, Indonesia / Ilse Reijs and Jan-Noud Hutten, CC BY 2.0"
[4] "Anchialine Pond; Makena, Ahihi Kinau Natural Reserve, Maui, Hawaii / Design Pics Inc / Alamy Stock Photo"
Wikimedia images: - AralSea1989 2014.jpg
Flickr images: - “Blue, Purple and Grey Landscape” by Dominic Alves
Pinterest images: - “Apitatan in Santa Marta, Magdalena, Colombia, 2018” by Anouche Yuruten
iNaturalist observations: - Red-tailed Black Cockatoo by @NeoMapas - Sample of images from the project Mayan riviera coral reefs
Fotos from the Cordillera de Mérida field work by Stefano Pozzebon and shared by Alejandra Melfo.
Other figures from cited references.
R version 4.3.1 (2023-06-16)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS 15.1.1
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.11.0
locale:
[1] en_AU.UTF-8/en_AU.UTF-8/en_AU.UTF-8/C/en_AU.UTF-8/en_AU.UTF-8
time zone: Australia/Melbourne
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] jsonlite_1.8.8 tidyr_1.3.0 magrittr_2.0.3 stringr_1.5.1
[5] ggpubr_0.6.0 htmltools_0.5.7 ggforce_0.4.1 ggplot2_3.5.0
[9] dplyr_1.1.4
loaded via a namespace (and not attached):
[1] utf8_1.2.4 generics_0.1.3 rstatix_0.7.2 stringi_1.8.4
[5] digest_0.6.33 evaluate_0.23 grid_4.3.1 fastmap_1.1.1
[9] rprojroot_2.0.4 backports_1.4.1 gridExtra_2.3 purrr_1.0.2
[13] fansi_1.0.6 scales_1.3.0 tweenr_2.0.2 abind_1.4-5
[17] cli_3.6.3 rlang_1.1.4 polyclip_1.10-6 cowplot_1.1.1
[21] munsell_0.5.0 withr_3.0.1 yaml_2.3.8 tools_4.3.1
[25] ggsignif_0.6.4 colorspace_2.1-0 here_1.0.1 broom_1.0.5
[29] vctrs_0.6.5 R6_2.5.1 lifecycle_1.0.4 car_3.1-2
[33] MASS_7.3-60 pkgconfig_2.0.3 pillar_1.9.0 gtable_0.3.4
[37] glue_1.7.0 Rcpp_1.0.13 xfun_0.41 tibble_3.2.1
[41] tidyselect_1.2.1 knitr_1.45 farver_2.1.1 rmarkdown_2.25
[45] carData_3.0-5 labeling_0.4.3 compiler_4.3.1
ESA / Melbourne / 9 Dec 2024 / By: JR Ferrer-Paris @ UNSW Sydney